15 June 2018

THE MAJOR HISTOCOMPATIBILITY COMPLEX



Major Histocompatibility Complex (MHC) is cluster of genes encoding polymorphic cell–surface molecules (MHC class I and class II) that are involved in interaction with T cells. These molecules also play a major role in transplantation rejection. Several other nonpolymorphic proteins are encoded in this region. The MHC is referred to as “complex” because the genes are closely linked and inherited as a unit. The set of genes inherited by an individual from one parent is known as a haplotype.

MHC molecules have two critical functions: (1) to bind to peptides derived from protein antigens, and (2) once peptide has bound, to interact with a TCR. T–cell receptor (TCR) is a two–chain structure on T cells that binds antigen: αβ on the major set of T cells, ϒδ on the minor set of T cells. The TCR complex comprises the antigen–binding chains associated at the cell surface with the signal transduction molecules CD3 plus ζ (zeta) or η (neta).

The Human Leukocyte Antigen contains the genes coding for the polymorphic MHC class I and II class molecules and many other important genes and is located on chromosome 6.

Two major sets of MHC genes and products:

1. MHC class I is a molecule encoded by genes of the MHC that participates in antigen presentation to CD8+ (cytotoxic) T cells. MHC class I molecules are always expressed at the surface in association with a molecule known as β2–microglobulin (β2m).

The three independent human MHC class I genes and their cell surface products:

a.      HLA–A

b.      HLA–B

c.      HLA–C

2. MHC class II is a molecule encoded by genes of the MHC that participates in antigen presentation to CD4+ T cells.

The three independent human MHC class II genes and their cell surface products which all consist of α and β chain:

a. HLA–DP – the DPα chain always pair with DPβ and not with DQβ or DRβ, and the other pair of chains behave similarly. The α and β chain of each molecule are coded by an A and a B gene, respectively. The genes coding for DP α and β are known as DPA1 and DPB1, and for DQ α and β, DQA1 and DQB1, respectively.

b. HLA–DQ

c. HLA–DR – comprises approximately of seven known DRB genes and one A gene: the product of the A gene DRA1 combines with the product of one of the DRB genes to generate a DR αβ molecule.


Variables in MHC genes and products:

1. Genetic polymorphism

The phenomenon of having multiple stable forms of one gene in the population is known as genetic polymorphism. The MHC is the most highly polymorphic gene system in the body, and hence in the population. This extensive polymorphism of MHC genes therefore makes it very unlikely that two random individuals will express identical sets of MHC molecules. Polymorphism is the basis for rapid graft rejection between genetically different individuals.


2. Pattern of expression

MHC class I molecules are expressed on almost every nucleated cell in the body. MHC class II molecules have a somewhat more limited distribution than class I molecules: they are expressed under all conditions only on B lymphocytes, dendritic cells, and thymic epithelial cells. Nonetheless, many other cells, such as macrophages and endothelial cells, may be induced to express MHC class II molecules by activating factors such as IFN–ϒ.

The expression of MHC class I molecule is coordinate, in that all three MHC class I molecules are expressed on the cell surface at the same time. Similarly, MHC class II molecules are also coordinately expressed, but under distinct regulation. Thus, MHC class I molecules can be expressed in the absence of any MHC class II molecule. The level of MHC class I and II expression at the cell surface can be coordinately upregulated or downregulated by a number of stimuli.

In the absence of inducing factors, most cells express MHC class I molecules without expressing MHC class II molecules. Certain cells, such as B cells, constitutively express both MHC class I and class II molecules. By contrast, very few, if any, cells express MHC class II in the absence of MHC class I.


3. Codominant Expression

Codominant expression means that each of the cell of MHC class I and II are transcribed from both maternal and paternal chromosomes. As a consequence of codominant expression of MHC molecules, each cell within an individual therefore expresses six different MHC class I molecules and between 10 to 20 different MHC class II molecules.


Function of MHC molecules

1. Antigen processing and presentation

To activate the T–cell response to any foreign protein, the protein must be broken down into peptides, at least one of which must bind to and MHC molecule. Protein catabolism to peptides takes place in two cellular compartments: (1) within acid vesicles and (2) within the cytoplasm. Peptides generated in acid vesicles bind to newly synthesized MHC class II molecules, whereas peptides generated in the cytoplasm bind to newly synthesized MHC class I molecules. The interaction of peptide with MHC molecules and the movement of peptide–MHC complexes through the cell to the cell surface are facilitated by a series of molecular chaperones.

a. Generation of MHC Class II – Peptide Complexes

Exogenous antigens (e.g., dead virus vaccine) are taken into cells by endocytosis if the antigen is soluble or by phagocytosis, in specialized cells such as macrophages, if the antigen is particulate. These exogenous antigens include bacteria, viruses taken up by macrophages, and potentially harmless foreign proteins, such as ovalbumin or sheep red blood cells.

Once internalized, the antigen is contained in an intracellular vesicle that then fuses with existing endosomal or lysosomal vesicles. The endosomal and lysosomal vesicles are highly acidic (pH ~ 4.0) and contain an array of degradative enzymes like proteases, peptidases and cathepsins.

Acid vesicles containing the immunogenic peptides derived from protein antigens intersect with vesicles containing newly synthesized MHC class II molecules. MHC class II α and β chains are synthesized on ribosomes of the rough endoplasmic reticulum (ER). The chains associated in the ER with a molecule known as invariant chain (Ii, CD74); a region of the Ii interacts with the groove of the newly formed MHC class II molecule, preventing the binding of endogenous peptides found in the ER. Ii also acts as “chaperone” for the newly synthesized MHC class II chains: interaction with Ii allows the MHC class II α plus β chains to leave the ER and enter the endocytic pathway. Removal of Ii from the complex occurs in stages in acid vesicles; initially, Ii is degraded proteolytically, leaving a fragment known as CLIP (class II–associated invariant chain peptide) bound to the MHC class II groove.

In acid vesicles containing peptides derived from exogenous antigens, a molecule known as HLA–DM facilitates peptide exchange between the MHC class II – CLIP complex and peptides derived from exogenous antigens. In this way, a peptide – MHC class II complex is generated, which then moves to the cell surface where it can interact with a CD4+ T cell expressing the appropriate receptor.

The association of MHC class II molecules and processed peptides is selective for peptides between approximately 12 and 20 amino acids in length, and a single peptide binds with high affinity to some but not other allelic forms of molecule. The sequence and charge of the amino acids forming the peptide–binding groove of the MHC molecule determine which processed peptides are accommodated.

b. Generation of MHC Class I – Peptide Complexes

Endogenous antigens (e.g. viral or parasitic protein) are synthesized within the cell at the cytosolic compartment instead of acid vesicles.

The major mechanism for generating peptide fragments in the cytoplasm is via a giant protein complex known as the proteasome. The proteasome cuts the protein into peptide fragments 8 to 9 residues long and these peptides are selectively transported into the ER by the products of two transporter genes, known as TAP–1 and TAP–2.

Binding of peptides with newly synthesized MHC class I molecules takes place in the ER. Binding of peptide to MHC class I molecules is also selective, based on the structure of the binding groove of the MHC class I molecule and the peptide. Because the groove in the MHC class I binding site is closed at both ends, MHC class I molecules preferentially bind peptides of 8 – 9 amino acids in length, the length which results from cutting by the cytosolic proteasome.

Before peptide loading, the MHC class I and β2–microglobulin chains synthesize in the ER associate with chaperones, which assist in the correct folding of the MHC class I plus β2–microglobulin and directing the molecule through the ER. Peptide that binds to an MHC class I molecule in the ER moves via the Golgi apparatus to the cell surface where it may interact with a CD8+ T cell expressing the appropriate receptor.

2. MHC molecules bind peptides derived from self–molecules

As a consequence of the normal pathways of intracellular turnover and metabolism of cellular constituents, peptides derived from self–components such as ribosomal and mitochondrial proteins can also bind to MHC molecules. These self–components do not, however, generally result in T–cell activation. Either these components are present at a number too low to activate T cells or the T cells have been made tolerant to this combination of MHC and peptide.

Only a small number of MHC–foreign peptide complexes is required at the surface of the APC to generate immune response. It is believed that as few as 80 – 100 MHC–foreign peptide complexes on the surface of a cell are sufficient to trigger a T–cell response.

3. Inability to respond to antigen

For an antigen to generate a T–cell response, at least one peptide derived during processing must bind to one of these MHC molecules. A peptide that does not bind to an MHC molecule does not activate a T–cell response. Thus, it is possible that some individuals may respond to a small peptide, but other MHC–distinct individuals may not. If an entire antigen fails to generate a single peptide able to bind to an MHC molecule, the individual will not mount a T–cell response to that particular antigen. An inability to respond to naturally occurring pathogens is very rare, as pathogens generally contain multiple epitopes.

4. One antigen can trigger MHC Class I– or Class II–restricted responses

For example, if a viral antigen it taken up by macrophages such as vaccine with a non–infectious viral particle, processing occurs in acid vesicles and peptides bind to MHC class II molecules.

If, however, the same viral antigen is synthesized following the infection of a cell, processing occurs in the cytoplasm of the cell and peptides associate with MHC class I molecules. The peptides that associate with MHC class I may be different from those that bind to MHC class II. Thus, as a consequence of the selective binding of peptides to MHC molecules, CD4+ and CD8+ T cells in one individual may respond to different epitopes on the same antigen.



Comparison of the properties and function of MHC Class I and Class II


MHC Class I
MHC Class II

Structure


α chain + β2m


α and β


Domains


α1, α2, α3 + β2m


α1 + α2 and β1 + β2


Constitutive cellular
expression


Nearly all nucleated cells

Antigen presenting cells (B cells, dendritic cells, thymic epithelial cells)


Peptide binding
groove

Closed, binds 8 – 9 amino acid peptides formed by α1 and α2 domains


Open, binds 12 – 20 amino acid peptides formed by α1 and β1 domains


Peptide derived
from

Endogenous antigens, catabolized in the cytoplasm


Exogenous antigens, catabolized in acid compartments


Peptide presented to


CD8+ T cells


CD4+ T cells


β2m – beta 2 macroglobulin



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